Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS23340 | Not Available | Negative | 468705 - 468887 | 6961.61 |
| dna-binding transcriptional regulator oxyr | VSVS12_RS02160 | Q9X725 | Positive | 468837 - 469724 | 32806.7 |
| isl3 family transposase | VSVS12_RS02165 | Not Available | Negative | 469751 - 470944 | 46236.4 |
| isl3 family transposase | VSVS12_RS02170 | Not Available | Negative | 471048 - 472241 | 46236.4 |
| penicillin-binding protein 1a | VSVS12_RS02175 | Q9KNU5 | Negative | 472403 - 474946 | 94814.8 |
| type iv pilus biogenesis protein pilm | VSVS12_RS02180 | Not Available | Positive | 475089 - 476030 | 34722.2 |
| piln domain-containing protein | VSVS12_RS02185 | Not Available | Positive | 476050 - 476652 | 23152.1 |
| type 4a pilus biogenesis protein pilo | VSVS12_RS02190 | Not Available | Positive | 476645 - 477235 | 22463.0 |
| pilus assembly protein pilp | VSVS12_RS02195 | Not Available | Positive | 477222 - 477800 | 21556.3 |
| type iv pilus secretin pilq | VSVS12_RS02200 | P34750 | Positive | 477797 - 479515 | 62486.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



