Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase family protein | VSVS12_RS22485 | Not Available | Negative | 433384 - 433553 | 6359.72 |
| porin family protein | VSVS12_RS02010 | Not Available | Positive | 434469 - 434993 | 18690.0 |
| slbb domain-containing protein | VSVS12_RS02015 | Not Available | Positive | 435045 - 437702 | 96850.9 |
| wzz/fepe/etk n-terminal domain-containing protein | VSVS12_RS02020 | Not Available | Positive | 437834 - 438829 | 36562.8 |
| yjbh domain-containing protein | VSVS12_RS02025 | P32689 | Negative | 439152 - 441359 | 82814.4 |
| capsule biosynthesis gfcc family protein | VSVS12_RS02030 | Not Available | Negative | 441356 - 442141 | 29225.7 |
| yjbf family lipoprotein | VSVS12_RS02035 | P32687 | Negative | 442142 - 442804 | 24869.5 |
| hypothetical protein | VSVS12_RS02040 | Not Available | Negative | 442899 - 443141 | 7043.98 |
| atp-dependent protease subunit hslv | VSVS12_RS02045 | A5F4X4 | Positive | 443456 - 443998 | 19287.1 |
| hslu--hslv peptidase atpase subunit | VSVS12_RS02050 | Q87T21 | Positive | 444037 - 445380 | 50582.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



