Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c39 family peptidase | VSVS12_RS15610 | Not Available | Negative | 172243 - 172851 | 22696.1 |
| hypothetical protein | VSVS12_RS15615 | Not Available | Negative | 172922 - 173251 | 11234.3 |
| hypothetical protein | VSVS12_RS15620 | Not Available | Negative | 173266 - 173886 | 20881.7 |
| hypothetical protein | VSVS12_RS23420 | Not Available | Positive | 174429 - 174815 | 14441.4 |
| response regulator transcription factor | VSVS12_RS23425 | Not Available | Positive | 174824 - 175075 | 9621.71 |
| yibl family ribosome-associated protein | VSVS12_RS15630 | P0ADL0 | Negative | 175120 - 175476 | 13614.8 |
| duf4344 domain-containing metallopeptidase | VSVS12_RS15635 | Not Available | Positive | 175625 - 176404 | 30070.9 |
| methyl-accepting chemotaxis protein | VSVS12_RS15640 | Q9I0I6 | Positive | 176605 - 178266 | 59967.9 |
| duf805 domain-containing protein | VSVS12_RS15645 | P64591 | Negative | 178361 - 178720 | 13398.8 |
| trna (adenine(22)-n(1))-methyltransferase trmk | VSVS12_RS15650 | Not Available | Negative | 179190 - 179876 | 26509.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



