Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator cytr | VSVS12_RS01860 | P0ACN9 | Positive | 397196 - 398203 | 36995.8 |
| spor domain-containing protein | VSVS12_RS01865 | Not Available | Positive | 398429 - 398959 | 19805.1 |
| transcription/translation regulatory transformer protein rfah | VSVS12_RS01870 | P0AFW1 | Positive | 399386 - 399925 | 20327.6 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | VSVS12_RS01875 | Q8ZAE3 | Positive | 400283 - 401410 | 41913.6 |
| udp-n-acetyl-d-mannosamine dehydrogenase | VSVS12_RS01880 | Q8ZAE4 | Positive | 401424 - 402698 | 46445.3 |
| vi polysaccharide biosynthesis udp-n-acetylglucosamine c-6 dehydrogenase tvib | VSVS12_RS01885 | Q04972 | Positive | 402695 - 403969 | 46964.6 |
| sdr family oxidoreductase | VSVS12_RS01890 | Q7BJX9 | Positive | 404027 - 405055 | 38059.3 |
| lipopolysaccharide biosynthesis protein | VSVS12_RS01895 | Not Available | Positive | 405066 - 406346 | 47407.0 |
| glycosyltransferase | VSVS12_RS01900 | Not Available | Positive | 406333 - 407328 | 38750.3 |
| glycosyltransferase | VSVS12_RS01905 | Not Available | Positive | 407325 - 408365 | 40534.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



