Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide heptosyltransferase ii | VSVS12_RS01760 | P37421 | Negative | 373582 - 374640 | 39143.4 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | VSVS12_RS01765 | P24205 | Negative | 374637 - 375629 | 38504.9 |
| adp-glyceromanno-heptose 6-epimerase | VSVS12_RS01770 | Q87T56 | Negative | 375648 - 376589 | 35219.4 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | VSVS12_RS01775 | P44704 | Negative | 376822 - 378162 | 51370.0 |
| gnat family n-acetyltransferase | VSVS12_RS01780 | Not Available | Negative | 378267 - 378701 | 16572.3 |
| udp-n-acetylmuramate dehydrogenase | VSVS12_RS01785 | Q7MGQ8 | Positive | 378775 - 379836 | 39176.9 |
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | VSVS12_RS01790 | P37416 | Positive | 379833 - 380804 | 35422.8 |
| duf3135 domain-containing protein | VSVS12_RS01795 | Not Available | Positive | 380930 - 381295 | 13816.4 |
| co-chaperone groes | VSVS12_RS01800 | Q87KX3 | Positive | 381471 - 381761 | 10278.5 |
| chaperonin groel | VSVS12_RS01805 | Q9L7P5 | Positive | 381959 - 383605 | 57632.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



