Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease ph | VSVS12_RS01615 | Q8DDX4 | Positive | 345739 - 346455 | 25699.9 |
| orotate phosphoribosyltransferase | VSVS12_RS01620 | B5FFE3 | Positive | 346674 - 347315 | 23381.9 |
| kdo(2)-lipid iv(a) acyltransferase | VSVS12_RS01625 | P0ACV1 | Negative | 347552 - 348502 | 36561.4 |
| nucleoid occlusion factor slma | VSVS12_RS01630 | Q9KVD2 | Negative | 348560 - 349150 | 22810.7 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | VSVS12_RS01635 | Q87T89 | Negative | 349265 - 350464 | 42527.6 |
| methyl-accepting chemotaxis protein | VSVS12_RS01640 | Q9I0I6 | Positive | 350703 - 352382 | 60873.3 |
| radc family protein | VSVS12_RS01645 | Q87T86 | Positive | 352504 - 353178 | 25141.3 |
| 50s ribosomal protein l28 | VSVS12_RS01650 | B7VHK3 | Positive | 353460 - 353696 | 9030.12 |
| 50s ribosomal protein l33 | VSVS12_RS01655 | A7MSP9 | Positive | 353711 - 353881 | 6510.09 |
| hypothetical protein | VSVS12_RS01660 | Not Available | Positive | 354004 - 354504 | 19542.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



