Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-n-acetylhexosaminidase | VSVS12_RS01560 | P13670 | Positive | 331629 - 334274 | 97275.9 |
| atp-dependent dna helicase recg | VSVS12_RS01565 | Q8XD86 | Negative | 334693 - 336771 | 76419.0 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | VSVS12_RS01570 | P0AGJ3 | Negative | 337072 - 337755 | 25485.6 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | VSVS12_RS01575 | Q9KNM2 | Negative | 337821 - 339941 | 79945.3 |
| dna-directed rna polymerase subunit omega | VSVS12_RS01580 | B7VHI0 | Negative | 339979 - 340251 | 10100.0 |
| guanylate kinase | VSVS12_RS01585 | Q8DDV6 | Negative | 340364 - 340987 | 23492.9 |
| ncs2 family permease | VSVS12_RS01595 | Q57772 | Positive | 341524 - 342894 | 48455.6 |
| phosphate-starvation-inducible protein psie | VSVS12_RS01600 | Not Available | Positive | 343021 - 343446 | 16232.5 |
| pyridoxal kinase pdxy | VSVS12_RS01605 | Q6LP62 | Positive | 343726 - 344589 | 31578.2 |
| yicc/yloc family endoribonuclease | VSVS12_RS01610 | P23839 | Negative | 344676 - 345542 | 32974.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



