Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-5-phosphate isomerase rpia | VSVS12_RS23040 | C5BMC8 | Negative | 161927 - 162622 | 24172.2 |
| transketolase | VSVS12_RS15565 | Q9KLW7 | Negative | 162623 - 164620 | 72552.8 |
| transaldolase | VSVS12_RS15570 | A4Y494 | Negative | 164635 - 165588 | 34997.8 |
| had family phosphatase | VSVS12_RS15575 | P54607 | Negative | 165585 - 166328 | 27201.6 |
| iron-containing alcohol dehydrogenase | VSVS12_RS15580 | P71017 | Negative | 166352 - 167509 | 41203.4 |
| ribulose-phosphate 3-epimerase | VSVS12_RS15585 | Not Available | Negative | 167581 - 168291 | 26512.9 |
| cof-type had-iib family hydrolase | VSVS12_RS15590 | P96741 | Negative | 168301 - 169143 | 30647.7 |
| hth-type transcriptional regulator ular | VSVS12_RS15595 | A9MFM3 | Positive | 169357 - 170133 | 28636.1 |
| transporter | VSVS12_RS15600 | Not Available | Positive | 170525 - 171520 | 35929.1 |
| hypothetical protein | VSVS12_RS15605 | Not Available | Negative | 171593 - 172240 | 23301.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



