Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-aminoacyl-trna deacylase | VSVS12_RS01410 | B7VHE8 | Positive | 300978 - 301412 | 15973.2 |
| bifunctional gnat family n-acetyltransferase/hotdog fold thioesterase | VSVS12_RS01415 | P0ADQ4 | Positive | 301522 - 302451 | 35454.8 |
| asma family protein | VSVS12_RS01420 | Not Available | Negative | 302415 - 304334 | 71873.6 |
| phosphoenolpyruvate carboxykinase (atp) | VSVS12_RS01425 | A7MZB2 | Negative | 304446 - 306074 | 59936.7 |
| hsp33 family molecular chaperone hslo | VSVS12_RS01430 | Q87TE0 | Negative | 306411 - 307286 | 32479.5 |
| ribosome-associated heat shock protein hsp15 | VSVS12_RS01435 | P0ACH0 | Negative | 307316 - 307702 | 14873.8 |
| type ii secretion system protein gspc | VSVS12_RS01440 | P45777 | Positive | 307937 - 308815 | 31973.4 |
| type ii secretion system secretin gspd | VSVS12_RS01445 | P45779 | Positive | 308852 - 310876 | 73127.3 |
| type ii secretion system atpase gspe | VSVS12_RS01450 | P37093 | Positive | 310873 - 312366 | 55188.7 |
| type ii secretion system inner membrane protein gspf | VSVS12_RS01455 | P45780 | Positive | 312366 - 313595 | 44987.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



