Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 287905 - 287995 | Not Available |
| adenosine deaminase | VSVS12_RS01365 | Q87TF3 | Negative | 288242 - 289246 | 36184.3 |
| eal domain-containing protein | VSVS12_RS01370 | Not Available | Negative | 289345 - 291879 | 95116.6 |
| nitrogen regulation protein nr(i) | VSVS12_RS01375 | P0AFB9 | Negative | 292045 - 293448 | 52114.1 |
| nitrogen regulation protein nr(ii) | VSVS12_RS01380 | P19906 | Negative | 293488 - 294537 | 38947.3 |
| glutamate--ammonia ligase | VSVS12_RS01385 | Q9KNJ2 | Negative | 294873 - 296282 | 51655.2 |
| translational gtpase typa | VSVS12_RS01390 | P0A3B2 | Positive | 296856 - 298688 | 67428.4 |
| aaa family atpase | VSVS12_RS01395 | Not Available | Positive | 298824 - 299363 | 19656.5 |
| duf2959 domain-containing protein | VSVS12_RS01400 | Not Available | Negative | 299367 - 300008 | 23985.2 |
| virulence factor brkb family protein | VSVS12_RS01405 | B7VHE7 | Positive | 300095 - 301006 | 33521.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



