Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertion efficiency factor yidd | VSVS12_RS22475 | Q9KVY3 | Negative | 215737 - 215994 | 9332.5 |
| ribonuclease p protein component | VSVS12_RS01020 | Q8DDI3 | Negative | 215961 - 216284 | 12529.0 |
| 50s ribosomal protein l34 | VSVS12_RS01025 | A7N1E5 | Negative | 216331 - 216465 | 5180.57 |
| amino acid abc transporter atp-binding protein | VSVS12_RS01030 | P54954 | Negative | 216693 - 217430 | 27144.7 |
| amino acid abc transporter permease | VSVS12_RS01035 | P52625 | Negative | 217427 - 218098 | 25004.6 |
| amino acid abc transporter substrate-binding protein | VSVS12_RS01040 | P52626 | Negative | 218184 - 218942 | 27561.6 |
| chromosomal replication initiator protein dnaa | VSVS12_RS01045 | A7N1E9 | Positive | 219367 - 220773 | 53121.4 |
| dna polymerase iii subunit beta | VSVS12_RS01050 | Q9KVX5 | Positive | 220860 - 221960 | 40623.6 |
| dna replication/repair protein recf | VSVS12_RS01055 | A7N1F1 | Positive | 221962 - 223041 | 41071.2 |
| dna topoisomerase (atp-hydrolyzing) subunit b | VSVS12_RS01060 | O51859 | Positive | 223059 - 225479 | 89761.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



