Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| brct domain-containing protein | VSVS12_RS15510 | Not Available | Negative | 147447 - 148358 | 33772.2 |
| transposase | VSVS12_RS15515 | Not Available | Positive | 148808 - 149686 | 33784.4 |
| phosphodiester glycosidase family protein | VSVS12_RS15520 | Not Available | Negative | 150014 - 151591 | 55697.6 |
| nird/ygiw/ydei family stress tolerance protein | VSVS12_RS15525 | Not Available | Positive | 151925 - 152299 | 13248.9 |
| catalase | VSVS12_RS15530 | O68146 | Negative | 152381 - 153811 | 54493.8 |
| amino acid permease | VSVS12_RS15535 | Not Available | Positive | 154437 - 155600 | 41867.3 |
| amino acid permease | VSVS12_RS15540 | Q5E5M9 | Positive | 155830 - 156993 | 41793.5 |
| alginate export family protein | VSVS12_RS15545 | Not Available | Negative | 157321 - 158736 | 53833.0 |
| pts transporter subunit eiic | VSVS12_RS15550 | P19642 | Negative | 158874 - 160457 | 57476.7 |
| sapep family mn(2+)-dependent dipeptidase | VSVS12_RS15555 | O34944 | Negative | 160461 - 161867 | 52172.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



