Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit c | VSVS12_RS00970 | Q5E1N2 | Negative | 205703 - 205960 | 8707.19 |
| f0f1 atp synthase subunit a | VSVS12_RS00975 | A7N0Y8 | Negative | 206018 - 206830 | 30050.8 |
| f0f1 atp synthase subunit i | VSVS12_RS00980 | P12983 | Negative | 206839 - 207228 | 13531.2 |
| parb/repb/spo0j family partition protein | VSVS12_RS00985 | Q9KNG7 | Negative | 207418 - 208299 | 32210.8 |
| para family protein | VSVS12_RS00990 | P0A149 | Negative | 208328 - 209101 | 28096.0 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | VSVS12_RS00995 | B7VN06 | Negative | 209116 - 209748 | 24225.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | VSVS12_RS01000 | Q87K98 | Negative | 209748 - 211643 | 69964.5 |
| fmn-binding protein mioc | VSVS12_RS01005 | Q9KVY6 | Negative | 212115 - 212549 | 15531.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | VSVS12_RS01010 | Q5E8Z9 | Negative | 212635 - 213996 | 49192.7 |
| membrane protein insertase yidc | VSVS12_RS01015 | A7N0X9 | Negative | 214115 - 215734 | 60309.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



