Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 182489 - 182564 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 182569 - 182644 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 182738 - 184284 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 184661 - 184776 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 184869 - 187762 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 188059 - 189605 | Not Available |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | VSVS12_RS00900 | Q9L6L1 | Negative | 190117 - 190644 | 20429.8 |
| trkh family potassium uptake protein | VSVS12_RS00905 | Q87TN7 | Negative | 190654 - 192111 | 53068.8 |
| yigz family protein | VSVS12_RS00910 | P44842 | Negative | 192150 - 192773 | 22464.9 |
| fatty acid oxidation complex subunit alpha fadb | VSVS12_RS00915 | A7N1D2 | Positive | 192975 - 195146 | 78909.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



