Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | VSVS12_RS00770 | Q87TJ6 | Negative | 161795 - 162574 | 28411.3 |
| eal domain-containing protein | VSVS12_RS00775 | Not Available | Negative | 162634 - 165810 | 120987.0 |
| transcriptional regulator asnc | VSVS12_RS00780 | P0ACI8 | Positive | 165916 - 166380 | 17305.0 |
| hypothetical protein | VSVS12_RS00785 | Not Available | Negative | 166452 - 166736 | 10581.8 |
| multidrug effflux mfs transporter | VSVS12_RS00790 | B5XZP2 | Negative | 166920 - 168074 | 41286.4 |
| lysr family transcriptional regulator | VSVS12_RS00795 | C4ZYY9 | Positive | 168215 - 169156 | 35856.1 |
| aminopeptidase p family protein | VSVS12_RS00800 | Q5AVF0 | Positive | 169310 - 171097 | 65668.2 |
| 2-iminoacetate synthase thih | VSVS12_RS00805 | P30140 | Negative | 171226 - 172338 | 42438.8 |
| thiazole synthase | VSVS12_RS00810 | Q8DDL8 | Negative | 172348 - 173112 | 26593.2 |
| sulfur carrier protein this | VSVS12_RS00815 | O32583 | Negative | 173115 - 173324 | 7468.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



