Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS00720 | Not Available | Negative | 150455 - 151684 | 47661.2 |
| tnsd family tn7-like transposition protein | VSVS12_RS00725 | Not Available | Negative | 151819 - 153423 | 61024.7 |
| atp-binding protein | VSVS12_RS00730 | P05846 | Negative | 153455 - 154879 | 53731.0 |
| mu transposase c-terminal domain-containing protein | VSVS12_RS00735 | Not Available | Negative | 154876 - 157008 | 80755.9 |
| tnsa endonuclease n-terminal domain-containing protein | VSVS12_RS00740 | Not Available | Negative | 156995 - 157822 | 31344.4 |
| nad(p)/fad-dependent oxidoreductase | VSVS12_RS00745 | P37631 | Negative | 157955 - 159142 | 43713.6 |
| universal stress protein uspb | VSVS12_RS00750 | B7VHB5 | Negative | 159283 - 159606 | 12330.4 |
| non-heme ferritin | VSVS12_RS00755 | P43707 | Negative | 159679 - 160206 | 19963.6 |
| universal stress protein uspa | VSVS12_RS00760 | Q8ZA49 | Positive | 160360 - 160785 | 15746.7 |
| carboxylate/amino acid/amine transporter | VSVS12_RS00765 | O68826 | Positive | 160845 - 161729 | 32338.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



