Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase i | VSVS12_RS00620 | P00582 | Negative | 128224 - 131025 | 104046.0 |
| porphobilinogen synthase | VSVS12_RS00625 | Q59643 | Negative | 131778 - 132821 | 38363.0 |
| tatd family hydrolase | VSVS12_RS00630 | P37545 | Positive | 132984 - 133745 | 28316.7 |
| twin-arginine translocase subunit tatc | VSVS12_RS00635 | P69424 | Negative | 133831 - 134583 | 27989.9 |
| sec-independent protein translocase protein tatb | VSVS12_RS00640 | Q87TH0 | Negative | 134648 - 135028 | 14059.8 |
| sec-independent protein translocase subunit tata | VSVS12_RS00645 | B7VHC4 | Negative | 135032 - 135274 | 8723.49 |
| ubiquinone biosynthesis regulatory protein kinase ubib | VSVS12_RS00650 | Q87TH2 | Negative | 135325 - 136959 | 62530.9 |
| scp2 domain-containing protein | VSVS12_RS00655 | Q9L6M5 | Negative | 136956 - 137561 | 22618.4 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | VSVS12_RS00660 | Q8DDP9 | Negative | 137570 - 138352 | 28990.6 |
| dna recombination protein rmuc | VSVS12_RS00665 | Q9KVQ7 | Negative | 138506 - 140056 | 59025.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



