Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux rnd transporter permease subunit | VSVS12_RS00565 | Q57124 | Positive | 115755 - 118880 | 112161.0 |
| ubiquinone biosynthesis accessory factor ubik | VSVS12_RS00570 | Q46868 | Positive | 119045 - 119296 | 9618.67 |
| ketol-acid reductoisomerase | VSVS12_RS00575 | Q8DDC8 | Negative | 119501 - 120985 | 54801.4 |
| hth-type transcriptional activator ilvy | VSVS12_RS00580 | P44821 | Positive | 121131 - 122021 | 32872.8 |
| oxygen-independent coproporphyrinogen iii oxidase | VSVS12_RS00585 | P32131 | Negative | 122074 - 123462 | 53444.9 |
| duf2489 domain-containing protein | VSVS12_RS00590 | Not Available | Negative | 123651 - 124139 | 18385.5 |
| der gtpase-activating protein yihi | VSVS12_RS00595 | A7MTV7 | Negative | 124148 - 124708 | 20934.7 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | VSVS12_RS00600 | Not Available | Negative | 124708 - 125346 | 24859.6 |
| cytochrome c | VSVS12_RS00610 | Q52369 | Negative | 126156 - 126773 | 22030.4 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | VSVS12_RS00615 | Q87TG0 | Positive | 126922 - 127587 | 24599.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



