Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjht family mutarotase | VSVS12_RS15460 | Q9KR70 | Negative | 137146 - 138225 | 38796.4 |
| n-acetylneuraminate epimerase | VSVS12_RS15465 | A5F7B3 | Negative | 138229 - 139380 | 41479.6 |
| murr/rpir family transcriptional regulator | VSVS12_RS15470 | Q97MK5 | Negative | 139545 - 140378 | 30047.0 |
| dihydrodipicolinate synthase family protein | VSVS12_RS15475 | Q9DCJ9 | Negative | 140565 - 141461 | 31846.3 |
| trap transporter large permease | VSVS12_RS15480 | Q9KR66 | Negative | 141525 - 142808 | 45571.9 |
| trap transporter small permease | VSVS12_RS15485 | Q9KR65 | Negative | 142815 - 143336 | 19582.4 |
| sialic acid trap transporter substrate-binding protein siap | VSVS12_RS15490 | Q9KR64 | Negative | 143402 - 144367 | 35647.8 |
| putative n-acetylmannosamine-6-phosphate 2-epimerase | VSVS12_RS15495 | Q9KR62 | Positive | 144645 - 145343 | 24695.4 |
| n-acetylmannosamine kinase | VSVS12_RS15500 | A5F7C0 | Positive | 145343 - 146224 | 30590.7 |
| n-acetylglucosamine-6-phosphate deacetylase | VSVS12_RS15505 | O32445 | Positive | 146227 - 147360 | 40590.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



