Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter rard | VSVS12_RS00365 | Q9KVF1 | Positive | 68797 - 69711 | 33658.1 |
| arac family transcriptional regulator | VSVS12_RS00370 | Not Available | Positive | 69778 - 70575 | 30634.5 |
| lyse family translocator | VSVS12_RS00375 | Q8Z3B3 | Positive | 70647 - 71300 | 23531.5 |
| dna helicase ii | VSVS12_RS00380 | P03018 | Negative | 72266 - 74440 | 82634.5 |
| duf2282 domain-containing protein | VSVS12_RS00385 | Not Available | Positive | 74697 - 74957 | 8436.16 |
| duf692 domain-containing protein | VSVS12_RS00390 | Q87KG2 | Positive | 75107 - 75925 | 30838.4 |
| dna-binding domain-containing protein | VSVS12_RS00395 | Not Available | Positive | 75922 - 76704 | 28756.1 |
| doxx family protein | VSVS12_RS00400 | Not Available | Positive | 76714 - 77169 | 17431.0 |
| oligopeptidase a | VSVS12_RS00405 | P27298 | Negative | 77282 - 79324 | 77070.0 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | VSVS12_RS00410 | P37634 | Positive | 79587 - 80426 | 32209.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



