Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s iron-sulfur cluster-binding protein | VSVS12_RS00315 | P09735 | Negative | 57478 - 57747 | 9942.03 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | VSVS12_RS00320 | Q87KI0 | Negative | 57747 - 59591 | 69212.3 |
| hypothetical protein | VSVS12_RS00325 | Not Available | Negative | 59682 - 60680 | 38133.2 |
| transcription termination factor rho | VSVS12_RS00330 | P0A296 | Negative | 60783 - 62042 | 46872.8 |
| thioredoxin trxa | VSVS12_RS00335 | P0AA27 | Negative | 62246 - 62572 | 11638.0 |
| atp-dependent rna helicase rhlb | VSVS12_RS00340 | Q8DDN6 | Positive | 62684 - 63985 | 48989.6 |
| guanosine-5'-triphosphate,3'-diphosphate diphosphatase | VSVS12_RS00345 | Q87KH4 | Positive | 63992 - 65482 | 55072.5 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | VSVS12_RS00350 | P37619 | Negative | 65593 - 66273 | 25677.8 |
| duf3630 family protein | VSVS12_RS00355 | Not Available | Negative | 66484 - 66819 | 12652.9 |
| atp-dependent dna helicase recq | VSVS12_RS00360 | P15043 | Negative | 66812 - 68650 | 69089.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



