Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | VSVS12_RS00160 | P59588 | Positive | 26911 - 27900 | 38416.0 |
| cof-type had-iib family hydrolase | VSVS12_RS00165 | P27848 | Positive | 28031 - 28858 | 31026.6 |
| cog3650 family protein | VSVS12_RS00170 | Not Available | Positive | 29057 - 30598 | 56936.4 |
| pp_00034 | VSVS12_RS00175 | Not Available | Positive | 30598 - 31227 | Not Available |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase yigb | VSVS12_RS00180 | P0ADP0 | Negative | 31252 - 31965 | 27390.6 |
| tyrosine recombinase xerc | VSVS12_RS00185 | Q87KJ6 | Negative | 32018 - 32938 | 34762.0 |
| duf484 family protein | VSVS12_RS00190 | Not Available | Negative | 32910 - 33614 | 26432.4 |
| diaminopimelate epimerase | VSVS12_RS00195 | Q8DD81 | Negative | 33629 - 34459 | 30621.6 |
| diaminopimelate decarboxylase | VSVS12_RS00200 | Q9KVL7 | Negative | 34470 - 35723 | 45902.7 |
| lps translocon maturation chaperone lptm | VSVS12_RS22450 | Not Available | Negative | 35780 - 35998 | 7696.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



