Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter dinf | VSVS12_RS00010 | P28303 | Negative | 776 - 2080 | 47950.0 |
| class i sam-dependent methyltransferase | VSVS12_RS00015 | Not Available | Negative | 2157 - 2969 | 30933.1 |
| transcriptional repressor lexa | VSVS12_RS00020 | Q87KN2 | Negative | 3069 - 3689 | 22723.4 |
| diacylglycerol kinase | VSVS12_RS00025 | P44424 | Negative | 3775 - 4137 | 13552.0 |
| glycerol-3-phosphate 1-o-acyltransferase plsb | VSVS12_RS00030 | Q7MQ86 | Positive | 4338 - 6794 | 91721.3 |
| 4-hydroxybenzoate octaprenyltransferase | VSVS12_RS00035 | B7VMA0 | Negative | 6925 - 7779 | 31994.3 |
| chorismate lyase | VSVS12_RS00040 | Q87KM8 | Negative | 7780 - 8319 | 20416.8 |
| flagellar basal body-associated protein flil | VSVS12_RS00045 | Not Available | Positive | 8486 - 8896 | 15334.7 |
| rhomboid family intramembrane serine protease glpg | VSVS12_RS00050 | A1JSF0 | Negative | 8970 - 9794 | 30891.1 |
| thiosulfate sulfurtransferase glpe | VSVS12_RS00055 | Q87KM5 | Negative | 9803 - 10123 | 11778.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



