Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | VSVS12_RS22020 | Not Available | Positive | 108299 - 109069 | 29649.4 |
| hypothetical protein | VSVS12_RS22025 | Not Available | Positive | 109071 - 109298 | 8869.7 |
| hypothetical protein | VSVS12_RS22030 | Not Available | Positive | 109295 - 109984 | 26996.1 |
| pcfj domain-containing protein | VSVS12_RS22035 | Not Available | Positive | 109981 - 111618 | 63635.9 |
| is630 family transposase | VSVS12_RS22040 | Not Available | Positive | 111731 - 112748 | 36755.8 |
| abc transporter substrate-binding protein | VSVS12_RS22045 | Not Available | Negative | 113141 - 114235 | 40514.2 |
| abc transporter permease | VSVS12_RS22050 | Not Available | Negative | 114235 - 115068 | 30818.6 |
| abc transporter permease | VSVS12_RS22055 | P31135 | Negative | 115140 - 116009 | 31820.0 |
| abc transporter atp-binding protein | VSVS12_RS22060 | Q30V33 | Negative | 116009 - 117085 | 39899.8 |
| glycerophosphodiester phosphodiesterase family protein | VSVS12_RS22065 | O07592 | Positive | 117274 - 118104 | 31561.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



