Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf957 domain-containing protein | VSVS12_RS21825 | Not Available | Positive | 73778 - 74266 | 18485.2 |
| hypothetical protein | VSVS12_RS21830 | Not Available | Positive | 74263 - 74583 | 12036.6 |
| hypothetical protein | VSVS12_RS21835 | Not Available | Positive | 74602 - 74787 | 6927.08 |
| hypothetical protein | VSVS12_RS21845 | Not Available | Negative | 75149 - 76129 | 36887.5 |
| para family protein | VSVS12_RS21850 | Not Available | Negative | 76140 - 77396 | 47167.2 |
| repb family plasmid replication initiator protein | VSVS12_RS21855 | P24042 | Negative | 77943 - 78785 | 32151.1 |
| helix-turn-helix transcriptional regulator | VSVS12_RS21860 | Not Available | Negative | 79040 - 79378 | 12449.1 |
| trai domain-containing protein | VSVS12_RS21865 | Not Available | Positive | 80194 - 80697 | 19295.7 |
| is4 family transposase | VSVS12_RS21870 | Not Available | Positive | 80757 - 81965 | 45975.1 |
| trai domain-containing protein | VSVS12_RS21875 | Not Available | Positive | 81994 - 83529 | 56276.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



