Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3487 family protein | VSVS12_RS21680 | Not Available | Positive | 48971 - 49300 | 12240.5 |
| hypothetical protein | VSVS12_RS21685 | Not Available | Positive | 49311 - 49724 | 15589.1 |
| hypothetical protein | VSVS12_RS21690 | Not Available | Positive | 49714 - 50070 | 13731.2 |
| pfl_4703 family integrating conjugative element protein | VSVS12_RS21695 | Not Available | Positive | 50067 - 50702 | 24130.3 |
| tigr03749 family integrating conjugative element protein | VSVS12_RS21700 | Not Available | Positive | 50702 - 51550 | 30228.9 |
| tigr03752 family integrating conjugative element protein | VSVS12_RS21705 | Not Available | Positive | 51543 - 52943 | 49197.8 |
| tigr03751 family conjugal transfer lipoprotein | VSVS12_RS21710 | Not Available | Positive | 52930 - 53343 | 15350.4 |
| conjugative transfer atpase | VSVS12_RS21715 | Not Available | Positive | 53343 - 56057 | 102788.0 |
| tigr03756 family integrating conjugative element protein | VSVS12_RS21720 | Not Available | Positive | 56096 - 57022 | 33991.8 |
| integrating conjugative element protein | VSVS12_RS21725 | Not Available | Positive | 57039 - 58298 | 45471.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



