Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VSVS12_RS21630 | Not Available | Positive | 42838 - 43350 | 19466.6 |
| integrating conjugative element protein | VSVS12_RS21635 | Not Available | Positive | 43360 - 43764 | 14695.4 |
| hypothetical protein | VSVS12_RS21640 | Not Available | Positive | 43806 - 44003 | 6851.2 |
| type iv conjugative transfer system coupling protein trad | VSVS12_RS21645 | Not Available | Positive | 44204 - 46375 | 80977.4 |
| duf4400 domain-containing protein | VSVS12_RS21650 | Not Available | Positive | 46372 - 47022 | 24467.4 |
| hypothetical protein | VSVS12_RS21655 | Not Available | Negative | 47092 - 47601 | 19542.6 |
| arylsulfatase regulator | VSVS12_RS21660 | Not Available | Negative | 47639 - 47917 | 10816.0 |
| raqprd family integrative conjugative element protein | VSVS12_RS21665 | Not Available | Positive | 48066 - 48368 | 11229.6 |
| tigr03758 family integrating conjugative element protein | VSVS12_RS21670 | Not Available | Positive | 48365 - 48625 | 9645.05 |
| tigr03745 family integrating conjugative element membrane protein | VSVS12_RS21675 | Not Available | Positive | 48622 - 48966 | 12830.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



