Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecf-type riboflavin transporter substrate-binding protein | VSVS12_RS21365 | A7N6E0 | Positive | 1460233 - 1460781 | 19399.3 |
| abc transporter atp-binding protein | VSVS12_RS21370 | Q87G35 | Positive | 1460788 - 1462482 | 62529.3 |
| energy-coupling factor transporter transmembrane protein ecft | VSVS12_RS21375 | Not Available | Positive | 1462479 - 1463315 | 31346.1 |
| hypothetical protein | VSVS12_RS22355 | Not Available | Positive | 1361 - 1588 | 9053.11 |
| site-specific integrase | VSVS12_RS22360 | Not Available | Positive | 1581 - 2465 | 32813.1 |
| hypothetical protein | VSVS12_RS22365 | Not Available | Positive | 2462 - 3124 | 25031.4 |
| hypothetical protein | VSVS12_RS22370 | Not Available | Positive | 3225 - 3557 | 12481.5 |
| hypothetical protein | VSVS12_RS22375 | Not Available | Negative | 3613 - 4377 | 29181.8 |
| recombinase family protein | VSVS12_RS22380 | P22996 | Negative | 4388 - 4999 | 23275.1 |
| proq/fino family protein | VSVS12_RS22385 | Not Available | Positive | 5256 - 5783 | 19912.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



