Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase family protein | VSVS12_RS21315 | P75954 | Negative | 1447944 - 1448858 | 33584.9 |
| deoxyribodipyrimidine photo-lyase | VSVS12_RS21320 | Q9KNA8 | Negative | 1448858 - 1450309 | 56478.0 |
| merr family transcriptional regulator | VSVS12_RS21325 | P33358 | Negative | 1450387 - 1451187 | 29244.5 |
| duf523 and duf1722 domain-containing protein | VSVS12_RS21330 | P24252 | Negative | 1451177 - 1452127 | 36195.0 |
| purine-nucleoside phosphorylase | VSVS12_RS21335 | Q87G42 | Positive | 1452518 - 1453228 | 25498.8 |
| lactate dehydrogenase | VSVS12_RS21340 | Not Available | Positive | 1453512 - 1454984 | 56256.0 |
| hypothetical protein | VSVS12_RS21345 | Not Available | Positive | 1455108 - 1456577 | 57039.6 |
| ggdef domain-containing protein | VSVS12_RS21350 | Not Available | Positive | 1456577 - 1458157 | 59929.1 |
| duf3302 domain-containing protein | VSVS12_RS21355 | P32108 | Positive | 1458250 - 1458666 | 16418.6 |
| hlyd family secretion protein | VSVS12_RS21360 | P37683 | Positive | 1458669 - 1459799 | 41417.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



