Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c peroxidase | VSVS12_RS15305 | P55929 | Negative | 102894 - 103880 | 36237.4 |
| gnat family n-acetyltransferase | VSVS12_RS15310 | Not Available | Negative | 104255 - 104794 | 19416.9 |
| merr family transcriptional regulator | VSVS12_RS15315 | Not Available | Negative | 104855 - 106018 | 44126.4 |
| superoxide dismutase family protein | VSVS12_RS15320 | Q59689 | Positive | 106399 - 106911 | 17537.8 |
| isl3 family transposase | VSVS12_RS15325 | Not Available | Positive | 107078 - 108271 | 46208.4 |
| lysr family transcriptional regulator | VSVS12_RS15330 | Not Available | Negative | 108290 - 109180 | 32788.3 |
| pace efflux transporter | VSVS12_RS15335 | Q87QJ4 | Positive | 109334 - 109762 | 16015.3 |
| glutathione synthase | VSVS12_RS15340 | O22494 | Negative | 109852 - 111426 | 58508.7 |
| phosphatase | VSVS12_RS15350 | Q5E1G0 | Positive | 111906 - 112652 | 27466.5 |
| duf4056 domain-containing protein | VSVS12_RS15355 | Not Available | Negative | 112733 - 113863 | 42425.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



