Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan dd-metalloendopeptidase family protein | VSVS12_RS21170 | P0AFT0 | Negative | 1424579 - 1425832 | 46867.8 |
| isoamylase early set domain-containing protein | VSVS12_RS21175 | Not Available | Negative | 1426097 - 1426396 | 11694.8 |
| hypothetical protein | VSVS12_RS21180 | Not Available | Negative | 1426471 - 1427100 | 23724.4 |
| gfa family protein | VSVS12_RS21185 | Not Available | Positive | 1427207 - 1427638 | 16027.2 |
| yoak family protein | VSVS12_RS21190 | Not Available | Positive | 1427719 - 1428381 | 23778.7 |
| yjih family protein | VSVS12_RS21195 | P30267 | Positive | 1428899 - 1430269 | 49352.6 |
| hypothetical protein | VSVS12_RS23525 | Not Available | Negative | 1430427 - 1430552 | 4570.4 |
| dead/deah box helicase | VSVS12_RS21200 | Q5HME0 | Negative | 1430894 - 1432240 | 50307.0 |
| lpp/opri family alanine-zipper lipoprotein | VSVS12_RS21205 | Not Available | Positive | 1432552 - 1432800 | 8309.68 |
| nad(p)-dependent oxidoreductase | VSVS12_RS21210 | O33730 | Negative | 1433042 - 1433914 | 30989.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



