Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nupc/nupg family nucleoside cnt transporter | VSVS12_RS21125 | Not Available | Negative | 1416088 - 1417299 | 41861.4 |
| nad(p)h-dependent oxidoreductase | VSVS12_RS21130 | P96674 | Negative | 1417300 - 1417866 | 20946.8 |
| nuclear transport factor 2 family protein | VSVS12_RS23580 | Not Available | Positive | 1418289 - 1418603 | 12202.8 |
| hypothetical protein | VSVS12_RS23585 | Not Available | Positive | 1418566 - 1418814 | 9987.53 |
| redoxin domain-containing protein | VSVS12_RS21140 | Not Available | Positive | 1418828 - 1419361 | 19929.0 |
| lysr family transcriptional regulator | VSVS12_RS21145 | P67664 | Negative | 1419455 - 1420354 | 33591.5 |
| cold-shock protein | VSVS12_RS21150 | Q9S1B7 | Negative | 1420797 - 1421009 | 7583.89 |
| rod shape-determining protein roda | VSVS12_RS21155 | P0ABG8 | Positive | 1421827 - 1422936 | 39367.3 |
| ybhb/ybcl family raf kinase inhibitor-like protein | VSVS12_RS21160 | P77368 | Positive | 1423154 - 1423684 | 18790.3 |
| helix-turn-helix transcriptional regulator | VSVS12_RS21165 | Not Available | Positive | 1423717 - 1424484 | 29596.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



