Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | VSVS12_RS21075 | Not Available | Negative | 1405884 - 1406789 | 34047.0 |
| amidohydrolase | VSVS12_RS21080 | Q68AP4 | Positive | 1406926 - 1408551 | 60282.4 |
| is4 family transposase | VSVS12_RS21085 | Not Available | Positive | 1408655 - 1409863 | 45975.1 |
| hypothetical protein | VSVS12_RS21090 | Not Available | Negative | 1410054 - 1410551 | 19422.2 |
| duf3592 domain-containing protein | VSVS12_RS21095 | Not Available | Negative | 1410548 - 1411051 | 19236.4 |
| hypothetical protein | VSVS12_RS21100 | Not Available | Negative | 1411109 - 1411588 | 17459.3 |
| cora family divalent cation transporter | VSVS12_RS21105 | C6DJ80 | Negative | 1411733 - 1412737 | 37837.8 |
| voltage-gated potassium channel protein | VSVS12_RS21110 | P31069 | Positive | 1412910 - 1414118 | 44220.2 |
| nucleoside phosphorylase | VSVS12_RS21115 | Q5JJC1 | Negative | 1414285 - 1415016 | 26298.4 |
| crp/fnr family transcriptional regulator | VSVS12_RS21120 | Not Available | Positive | 1415323 - 1416003 | 25891.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



