Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| siderophore-interacting protein | VSVS12_RS21020 | Not Available | Positive | 1394801 - 1395520 | 26783.8 |
| lysr family transcriptional regulator | VSVS12_RS21025 | P43011 | Negative | 1395674 - 1396546 | 32619.4 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | VSVS12_RS21030 | P73138 | Positive | 1396730 - 1397878 | 40825.4 |
| s-formylglutathione hydrolase | VSVS12_RS21035 | A1AD14 | Positive | 1398068 - 1398907 | 30904.5 |
| hypothetical protein | VSVS12_RS21040 | Not Available | Positive | 1399147 - 1399548 | 14798.9 |
| rlua family pseudouridine synthase | VSVS12_RS21045 | Q9KP71 | Positive | 1399687 - 1401405 | 64441.0 |
| sugar o-acetyltransferase | VSVS12_RS21050 | P77791 | Negative | 1401524 - 1402075 | 19887.9 |
| nadh:flavin oxidoreductase | VSVS12_RS21055 | A4J778 | Negative | 1402139 - 1403233 | 40772.5 |
| hlyd family efflux transporter periplasmic adaptor subunit | VSVS12_RS21065 | Q87GA3 | Positive | 1404089 - 1404310 | 8407.02 |
| is4 family transposase | VSVS12_RS21070 | Not Available | Positive | 1404420 - 1405628 | 45975.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



