Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyse family translocator | VSVS12_RS20970 | Not Available | Negative | 1384706 - 1385323 | 22689.4 |
| integron integrase | VSVS12_RS20975 | P62590 | Positive | 1385614 - 1386576 | 37438.4 |
| 50s ribosomal protein l20 | VSVS12_RS20980 | B7VN20 | Negative | 1386703 - 1387056 | 13427.5 |
| 50s ribosomal protein l35 | VSVS12_RS20985 | A5EZ16 | Negative | 1387098 - 1387292 | 7278.33 |
| translation initiation factor if-3 | VSVS12_RS20990 | O68844 | Negative | 1387412 - 1387900 | 18190.2 |
| threonine--trna ligase | VSVS12_RS20995 | A7N009 | Negative | 1387967 - 1389895 | 73513.8 |
| methyl-accepting chemotaxis protein | VSVS12_RS21000 | A5F389 | Negative | 1390312 - 1391940 | 59472.9 |
| porin | VSVS12_RS21005 | Q52581 | Negative | 1392194 - 1393189 | 35688.2 |
| lrp/asnc family transcriptional regulator | VSVS12_RS21010 | P37424 | Negative | 1393376 - 1393816 | 16488.9 |
| lyse family translocator | VSVS12_RS21015 | A6T515 | Positive | 1393958 - 1394545 | 21642.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



