Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr c-terminal-related transcriptional regulator | VSVS12_RS20920 | O54294 | Negative | 1373671 - 1374342 | 25472.4 |
| trypsin-like serine protease | VSVS12_RS20925 | P00766 | Negative | 1374482 - 1375528 | 37588.0 |
| glycine cleavage system aminomethyltransferase gcvt | VSVS12_RS20930 | Q54DD3 | Negative | 1375703 - 1376821 | 40292.8 |
| helix-turn-helix domain-containing protein | VSVS12_RS20935 | Not Available | Negative | 1377099 - 1377722 | 23519.1 |
| glycine cleavage system protein gcvh | VSVS12_RS20945 | Q87I04 | Positive | 1378345 - 1378725 | 14030.0 |
| aminomethyl-transferring glycine dehydrogenase | VSVS12_RS20950 | A7N5C4 | Positive | 1378850 - 1381717 | 104942.0 |
| hypothetical protein | VSVS12_RS23520 | Not Available | Positive | 1381775 - 1381906 | 4781.96 |
| tetr/acrr family transcriptional regulator | VSVS12_RS20955 | Not Available | Positive | 1382266 - 1382874 | 22581.3 |
| duf2058 domain-containing protein | VSVS12_RS20960 | P51024 | Positive | 1383043 - 1383564 | 19902.9 |
| diguanylate cyclase domain-containing protein | VSVS12_RS20965 | Not Available | Positive | 1383794 - 1384633 | 31955.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



