Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | VSVS12_RS20870 | Q9KKU0 | Positive | 1363953 - 1364840 | 32259.2 |
| glutaredoxin domain-containing protein | VSVS12_RS20875 | Not Available | Positive | 1364972 - 1365586 | 22940.7 |
| isl3 family transposase | VSVS12_RS20880 | Q06126 | Positive | 1365719 - 1366912 | 46247.4 |
| hypothetical protein | VSVS12_RS20885 | Not Available | Negative | 1366973 - 1367323 | 13208.3 |
| multidrug effflux mfs transporter | VSVS12_RS20890 | Not Available | Negative | 1367438 - 1368664 | 44794.9 |
| lysr family transcriptional regulator | VSVS12_RS20895 | P77333 | Positive | 1368730 - 1369602 | 32614.3 |
| hlyd family efflux transporter periplasmic adaptor subunit | VSVS12_RS20900 | Q8EJM6 | Positive | 1369705 - 1371545 | 68059.5 |
| hypothetical protein | VSVS12_RS20905 | Not Available | Negative | 1371582 - 1372070 | 18616.8 |
| nicotinate-nicotinamide nucleotide adenylyltransferase | VSVS12_RS20910 | Not Available | Negative | 1372130 - 1372642 | 19156.1 |
| ammonia-dependent nad(+) synthetase | VSVS12_RS20915 | A7N654 | Positive | 1372745 - 1373572 | 30077.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



