Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is4 family transposase | VSVS12_RS20775 | Not Available | Positive | 1344751 - 1345959 | 45975.1 |
| hypothetical protein | VSVS12_RS23130 | Not Available | Negative | 1345917 - 1346150 | 9181.8 |
| hypothetical protein | VSVS12_RS20780 | Not Available | Negative | 1346494 - 1347336 | 30664.5 |
| transposase | VSVS12_RS20785 | Not Available | Positive | 1347860 - 1348738 | 33792.4 |
| duf3820 family protein | VSVS12_RS20790 | P0AD41 | Negative | 1349037 - 1349267 | 8854.98 |
| duf3313 domain-containing protein | VSVS12_RS20795 | Not Available | Negative | 1349391 - 1350062 | 24422.2 |
| helix-turn-helix transcriptional regulator | VSVS12_RS20800 | Not Available | Negative | 1350160 - 1350510 | 13563.5 |
| d-alanyl-d-alanine carboxypeptidase family protein | VSVS12_RS20805 | P0AEB4 | Negative | 1350745 - 1351911 | 41874.6 |
| nadh:ubiquinone oxidoreductase | VSVS12_RS20810 | Not Available | Negative | 1352087 - 1352443 | 12904.2 |
| cold-shock protein | VSVS12_RS20815 | Q9KN00 | Positive | 1353164 - 1353373 | 7506.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



