Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | VSVS12_RS20725 | Not Available | Negative | 1334848 - 1335891 | 37157.7 |
| pyridoxamine 5'-phosphate oxidase family protein | VSVS12_RS20730 | Not Available | Negative | 1336384 - 1337043 | 24433.1 |
| plp-dependent aminotransferase family protein | VSVS12_RS20735 | P94426 | Positive | 1337155 - 1338597 | 54053.1 |
| cold-shock protein | VSVS12_RS20740 | Not Available | Positive | 1338856 - 1339068 | 7597.93 |
| dsba family protein | VSVS12_RS20745 | Not Available | Negative | 1339133 - 1339768 | 24570.4 |
| patatin family protein | VSVS12_RS20750 | Not Available | Negative | 1339796 - 1340665 | 32150.7 |
| pyroglutamyl-peptidase i | VSVS12_RS20755 | A7N3R7 | Negative | 1340842 - 1341480 | 22647.1 |
| duf979 domain-containing protein | VSVS12_RS20760 | Not Available | Negative | 1341489 - 1342394 | 31987.4 |
| duf969 domain-containing protein | VSVS12_RS20765 | Not Available | Negative | 1342397 - 1343119 | 26165.5 |
| methyl-accepting chemotaxis protein | VSVS12_RS23555 | A5W2C8 | Negative | 1343715 - 1344644 | 33747.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



