Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | VSVS12_RS15255 | Not Available | Negative | 90337 - 90774 | 16676.3 |
| copper resistance protein nlpe | VSVS12_RS15260 | Not Available | Positive | 91040 - 91516 | 16946.9 |
| glycine zipper 2tm domain-containing protein | VSVS12_RS15265 | Not Available | Negative | 91607 - 92083 | 15683.6 |
| hypothetical protein | VSVS12_RS15270 | Not Available | Negative | 92279 - 94612 | 88149.9 |
| fggy-family carbohydrate kinase | VSVS12_RS15275 | Q96C11 | Negative | 94802 - 96436 | 59568.2 |
| abc transporter permease | VSVS12_RS15280 | P36948 | Negative | 96448 - 97407 | 33123.1 |
| abc transporter permease | VSVS12_RS15285 | P0AGI3 | Negative | 97407 - 98405 | 34996.8 |
| sugar abc transporter atp-binding protein | VSVS12_RS15290 | P36947 | Negative | 98398 - 99891 | 54117.6 |
| autoinducer 2 abc transporter substrate-binding protein | VSVS12_RS15295 | Not Available | Negative | 99988 - 100962 | 34879.9 |
| ferric reductase-like transmembrane domain-containing protein | VSVS12_RS15300 | Not Available | Positive | 101530 - 102846 | 48677.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



