Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase assembly protein | VSVS12_RS20675 | Q167V9 | Negative | 1324864 - 1325505 | 23771.5 |
| cytochrome c oxidase subunit i | VSVS12_RS20680 | Q1RI42 | Negative | 1325516 - 1327156 | 60855.2 |
| cytochrome c oxidase subunit ii | VSVS12_RS20685 | Q1RI44 | Negative | 1327153 - 1328316 | 42704.5 |
| phospho-sugar mutase | VSVS12_RS20690 | P18159 | Positive | 1328654 - 1330357 | 62454.8 |
| gnat family n-acetyltransferase | VSVS12_RS20695 | P19997 | Negative | 1330448 - 1330867 | 15753.7 |
| lyse family translocator | VSVS12_RS20700 | Not Available | Negative | 1331048 - 1331683 | 22703.9 |
| arac family transcriptional regulator | VSVS12_RS20705 | Not Available | Positive | 1331960 - 1332787 | 31657.5 |
| azlc family abc transporter permease | VSVS12_RS20710 | Not Available | Positive | 1332862 - 1333659 | 28289.6 |
| azld domain-containing protein | VSVS12_RS20715 | Not Available | Positive | 1333656 - 1333970 | 11432.7 |
| fumarylacetoacetate hydrolase family protein | VSVS12_RS20720 | P76004 | Negative | 1334081 - 1334695 | 22554.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



