Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| siderophore ferric iron reductase | VSVS12_RS20435 | Not Available | Negative | 1261699 - 1262433 | 28143.0 |
| lysr family transcriptional regulator | VSVS12_RS20440 | P72131 | Negative | 1262506 - 1263366 | 32301.3 |
| hlyd family secretion protein | VSVS12_RS20445 | B7NDL9 | Positive | 1263466 - 1264530 | 39152.7 |
| duf2955 domain-containing protein | VSVS12_RS20450 | Not Available | Positive | 1264549 - 1265556 | 37234.0 |
| hypothetical protein | VSVS12_RS20455 | Not Available | Negative | 1265647 - 1266426 | 28920.4 |
| laci family dna-binding transcriptional regulator | VSVS12_RS20460 | E1WAQ4 | Negative | 1266736 - 1267749 | 38122.0 |
| hypothetical protein | VSVS12_RS22855 | P13394 | Positive | 1267948 - 1268397 | 17418.2 |
| is4 family transposase | VSVS12_RS20465 | Not Available | Negative | 1268366 - 1269574 | 45975.1 |
| tyrosine-type recombinase/integrase | VSVS12_RS20470 | Not Available | Negative | 1269634 - 1270560 | 35799.4 |
| hypothetical protein | VSVS12_RS23515 | Not Available | Positive | 1270870 - 1270998 | 4532.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



