Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic amino acid dmt transporter yddg | VSVS12_RS20385 | D0ZXP9 | Positive | 1243737 - 1244648 | 33149.8 |
| diguanylate cyclase | VSVS12_RS20390 | Q54Q69 | Positive | 1244972 - 1250083 | 190017.0 |
| nucleoside hydrolase | VSVS12_RS20395 | Q652Q8 | Positive | 1250107 - 1252314 | 80884.8 |
| duf3574 domain-containing protein | VSVS12_RS20400 | Not Available | Positive | 1252316 - 1252768 | 17112.5 |
| tonb-dependent receptor | VSVS12_RS20405 | Q9Z3Q5 | Negative | 1252834 - 1254990 | 79300.7 |
| gntr family transcriptional regulator | VSVS12_RS20410 | Not Available | Negative | 1255432 - 1256388 | 35960.1 |
| fe(3+)-hydroxamate abc transporter permease fhub | VSVS12_RS20415 | O87656 | Negative | 1256606 - 1258603 | 70899.3 |
| hlyd family efflux transporter periplasmic adaptor subunit | VSVS12_RS20420 | Not Available | Negative | 1258693 - 1259547 | 32023.7 |
| abc transporter atp-binding protein | VSVS12_RS20425 | P07821 | Negative | 1259580 - 1260347 | 28401.2 |
| mfs transporter | VSVS12_RS20430 | Not Available | Positive | 1260500 - 1261687 | 42566.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



