Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | VSVS12_RS20335 | P42599 | Negative | 1233641 - 1234627 | 36098.1 |
| lyse family translocator | VSVS12_RS20340 | Not Available | Negative | 1234675 - 1235292 | 21797.3 |
| lysr family transcriptional regulator | VSVS12_RS20345 | A8ACM1 | Negative | 1235382 - 1236302 | 34332.6 |
| lrp/asnc family transcriptional regulator | VSVS12_RS20350 | Not Available | Negative | 1236295 - 1236744 | 17111.5 |
| l-methionine/branched-chain amino acid transporter | VSVS12_RS20355 | P39277 | Positive | 1236996 - 1238261 | 45218.5 |
| arac family transcriptional regulator | VSVS12_RS20360 | Not Available | Negative | 1238265 - 1239275 | 38334.6 |
| hypothetical protein | VSVS12_RS20365 | Not Available | Positive | 1239384 - 1239713 | 12142.7 |
| hlyd family secretion protein | VSVS12_RS20370 | P0AFV1 | Positive | 1239707 - 1240930 | 45681.6 |
| nudix hydrolase | VSVS12_RS20375 | Not Available | Negative | 1241249 - 1241653 | 15145.1 |
| nad-dependent succinate-semialdehyde dehydrogenase | VSVS12_RS20380 | Q6F9G0 | Negative | 1241926 - 1243395 | 52687.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



