Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen/starch/alpha-glucan phosphorylase | VSVS12_RS15200 | Not Available | Negative | 75125 - 77578 | 92911.6 |
| hth-type transcriptional regulator malt | VSVS12_RS15205 | Q9KNF3 | Positive | 78149 - 80905 | 105603.0 |
| nad(p)h-dependent oxidoreductase | VSVS12_RS15210 | P46072 | Positive | 81137 - 81796 | 24460.7 |
| tetratricopeptide repeat protein | VSVS12_RS15215 | Not Available | Positive | 82125 - 83000 | 33483.7 |
| immunoglobulin-like domain-containing protein | VSVS12_RS15220 | Q838S2 | Negative | 83219 - 85414 | 78647.2 |
| alpha/beta fold hydrolase | VSVS12_RS15230 | Q9JUV1 | Negative | 85698 - 86465 | 29058.0 |
| mbl fold metallo-hydrolase | VSVS12_RS15235 | Q56686 | Negative | 86671 - 87666 | 35821.9 |
| glucose pts transporter subunit eiib | VSVS12_RS15240 | Not Available | Positive | 88006 - 88299 | 10748.1 |
| glycoside hydrolase family 1 protein | VSVS12_RS15245 | Q48409 | Positive | 88339 - 89751 | 53290.8 |
| semisweet transporter | VSVS12_RS15250 | F9RBV9 | Positive | 90036 - 90329 | 10788.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



