Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family efflux transporter periplasmic adaptor subunit | VSVS12_RS20125 | P06695 | Positive | 1186410 - 1187810 | 52233.3 |
| hlyd family efflux transporter periplasmic adaptor subunit | VSVS12_RS20130 | Not Available | Negative | 1187873 - 1188335 | 16835.3 |
| glycoside hydrolase family 32 protein | VSVS12_RS20135 | P05656 | Negative | 1188999 - 1190462 | 55176.3 |
| abc transporter atp-binding protein | VSVS12_RS20140 | Not Available | Negative | 1190652 - 1192307 | 61167.5 |
| abc transporter permease | VSVS12_RS20145 | P24139 | Negative | 1192330 - 1193409 | 39789.9 |
| abc transporter permease | VSVS12_RS20150 | P42062 | Negative | 1193419 - 1194417 | 36815.0 |
| abc transporter substrate-binding protein | VSVS12_RS20155 | Q9X4Y1 | Negative | 1194467 - 1196527 | 77838.6 |
| hlyd family efflux transporter periplasmic adaptor subunit | VSVS12_RS22850 | Not Available | Negative | 1197041 - 1198239 | 44777.0 |
| carbohydrate porin | VSVS12_RS20180 | Not Available | Negative | 1198442 - 1199326 | 32904.8 |
| is4 family transposase | VSVS12_RS20185 | Not Available | Negative | 1199323 - 1200531 | 45975.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



