Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | VSVS12_RS20040 | Not Available | Positive | 1166919 - 1167416 | 18584.3 |
| is4 family transposase | VSVS12_RS20045 | Not Available | Negative | 1167574 - 1168782 | 45975.1 |
| laci family dna-binding transcriptional regulator | VSVS12_RS20050 | Q45831 | Negative | 1169331 - 1170317 | 35831.2 |
| sucrose-specific pts transporter subunit iibc | VSVS12_RS20055 | P22825 | Positive | 1170552 - 1171991 | 50480.5 |
| aminoimidazole riboside kinase | VSVS12_RS20060 | P22824 | Positive | 1172148 - 1173143 | 35787.3 |
| sucrose-6-phosphate hydrolase | VSVS12_RS20065 | Not Available | Positive | 1173140 - 1174585 | 55079.6 |
| hlyd family efflux transporter periplasmic adaptor subunit | VSVS12_RS20070 | Not Available | Negative | 1174861 - 1175119 | 8996.76 |
| hypothetical protein | VSVS12_RS23115 | Not Available | Positive | 1175552 - 1175722 | 6363.53 |
| carbohydrate porin | VSVS12_RS20075 | Not Available | Positive | 1175962 - 1177080 | 41176.7 |
| hypothetical protein | VSVS12_RS20080 | Not Available | Negative | 1177566 - 1178003 | 17184.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



