Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatinase | VSVS12_RS15150 | A8GIX7 | Positive | 63276 - 64205 | 33868.3 |
| hypothetical protein | VSVS12_RS15155 | Not Available | Negative | 64272 - 64667 | 15315.3 |
| dass family sodium-coupled anion symporter | VSVS12_RS15160 | Not Available | Negative | 64922 - 66310 | 49201.5 |
| alpha/beta hydrolase | VSVS12_RS15165 | Not Available | Negative | 66438 - 67283 | 30881.0 |
| tetr/acrr family transcriptional regulator | VSVS12_RS15170 | Not Available | Negative | 67416 - 68027 | 22973.4 |
| acyltransferase | VSVS12_RS15175 | Not Available | Positive | 68241 - 69263 | 38331.0 |
| dna mismatch repair protein | VSVS12_RS15180 | Not Available | Negative | 69313 - 69825 | 19502.9 |
| mapeg family protein | VSVS12_RS15185 | P64516 | Negative | 69887 - 70273 | 14058.1 |
| 1,4-alpha-glucan branching protein glgb | VSVS12_RS15190 | Q8D4P0 | Negative | 70389 - 72569 | 83705.9 |
| 4-alpha-glucanotransferase | VSVS12_RS15195 | Not Available | Negative | 72797 - 74980 | 81796.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



