Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-12
Gene Summary
Adenine Count
408996 bp
Thymine Count
410436 bp
Guanine Count
321711 bp
Cytosine Count
322367 bp
Genome Length
1463510 bp
Protein-coding Genes
1302 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | VSVS12_RS15880 | Not Available | - | 226927 - 228540 | 60705.6 |
| duf3486 family protein | VSVS12_RS15885 | Not Available | - | 228509 - 229051 | 20143.3 |
| hypothetical protein | VSVS12_RS15890 | Not Available | + | 229184 - 229846 | 24563.2 |
| hypothetical protein | VSVS12_RS23245 | Not Available | + | 229843 - 230433 | 22178.6 |
| phage tail protein | VSVS12_RS15900 | Not Available | + | 230426 - 230830 | 15096.9 |
| tail protein x | VSVS12_RS15905 | Not Available | + | 230827 - 231051 | 8421.35 |
| Tail protein | VSVS12_RS15910 | Not Available | + | 231039 - 232031 | 36322.2 |
| Baseplate j-like protein | VSVS12_RS15915 | Not Available | + | 232028 - 233158 | 41802.5 |
| hypothetical protein | VSVS12_RS15920 | Not Available | + | 233162 - 233497 | 12201.4 |
| hypothetical protein | VSVS12_RS15925 | Not Available | + | 233494 - 233709 | 7889.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
