Streptococcus suis strain DN13

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Description

Streptococcus suis strain DN13 is a Gram-positive, facultative anaerobic bacterium characterized by its cocci shape and chains, pairs, or single cell arrangements. It is non-motile and lacks flagella. This strain is mesophilic, with an optimal growth temperature of 37°C, which is typical for many pathogenic bacteria that infect warm-blooded hosts. S. suis strain DN13 has a specialized habitat and is known to have a free-living biotic relationship. It can infect various hosts, including Homo sapiens (humans), Metazoa, Danio rerio (zebrafish), and Sus scrofa (domestic pigs). The strain is associated with a range of serious health effects, such as endocarditis, meningitis, septicaemia, endophthalmitis, sepsis, arthritis, purulent meningitis, cerebral ischemia, and other streptococcal diseases, indicating its potential as a significant human and veterinary pathogen. The presence of a single membrane and a single replicon suggests a relatively simple cellular organization, which is not uncommon among bacteria. The pathogenicity of S. suis strain DN13, coupled with its ability to infect multiple hosts, highlights its ecological adaptability and potential role in zoonotic disease transmission. Understanding such traits can aid in developing targeted interventions to manage infections caused by this strain in both human and animal populations.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus suis
Strainstrain DN13

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Streptococcus suis strain DN13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Danio rerio
Cell arrangementChains - Pairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptococcus suis strain DN13


Gene Summary

Adenine Count

630152 bp

Thymine Count

626866 bp

Guanine Count

442737 bp

Cytosine Count

442429 bp

Genome Length

2142184 bp

Protein-coding Genes

2015 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosomal replication initiator protein dnaaA6M16_RS00005B9DSN7Positive40 - 141352703.6
dna polymerase iii subunit betaA6M16_RS00010P59651Positive1567 - 270341941.0
diacylglycerol kinase family proteinA6M16_RS00015Not AvailablePositive2795 - 367632673.5
duf951 domain-containing proteinA6M16_RS00020Not AvailablePositive3686 - 38897736.59
helix-turn-helix domain-containing proteinA6M16_RS00025Q5WNW9Positive3993 - 435213652.6
redox-regulated atpase ychfA6M16_RS00030P37518Positive4438 - 555341088.8
aminoacyl-trna hydrolaseA6M16_RS00035A4VYI0Positive5711 - 628021260.7
transcription-repair coupling factorA6M16_RS00040P37474Positive6280 - 9774132650.0
rna-binding s4 domain-containing proteinA6M16_RS00045P64405Positive9824 - 1009610451.9
septum formation initiator family proteinA6M16_RS00050Not AvailablePositive10083 - 1045114438.6

Displaying genes 1 – 10 of 2087 in total

Metabolites

106 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00008001,8-diazacyclotetradecane-2,9-dioneC12H22N2O2Chemical structure of 1,8-diazacyclotetradecane-2,9-dioneNot available
Average226.32Da
Monoisotopic226.168127956Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da

Displaying 1–10 of 106 metabolites

Health Effects

Health ConditionRelationReference
MeningitisCausesPMC11046750
EndocarditisCausesPMC11046750
ArthritisCausesPMC11046750
SepsisCausesPMC11046750
Purulent meningitisCausesPMC11046750
Cerebral ischemiaCausesPMC11046750
Streptococcal diseaseCausesPMC11542422
MeningitisCausesPMC11542422
SepticemiaCausesPMC11542422
EndocarditisCausesPMC11542422

Displaying health effects 1 – 10 of 32 in total